BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022F11LP1|AL427937
(1052 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1000 1827 0.0
>3x_Contig1000
Length = 4837
Score = 1827 bits (920), Expect = 0.0
Identities = 945/954 (99%), Gaps = 1/954 (0%)
Strand = Plus / Plus
Query: 100 acgagaattagt-cttccgctcaaaagtcaatttgccagacttaaaaaacttataacaat 158
|||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2 acgagaatcagtacttccgctcaaaattcaatttgccagacttaaaaaacttataacaat 61
Query: 159 cgtctagactttctgttacctcgataagtaatgtatattccatatggattattcttagac 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cgtctagactttctgttacctcgataagtaatgtatattccatatggattattcttagac 121
Query: 219 ccgacaggtaactagtaggcaaaatgtaaagttttctggttgtacgaaggttcgcctctt 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ccgacaggtaactagtaggcaaaatgtaaagttttctggttgtacgaaggttcgcctctt 181
Query: 279 ggcgtcatattagctgttgccagtwgtcatctcatccctaggaatatcaacaatcgggat 338
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 182 ggcgtcatattagctgttgccagtagtcatctcatccctaggaatatcaacaatcgggat 241
Query: 339 gagaacctgccaaaggaagaatggaaaaaaaaacgatcacgtgattttaatgatatactt 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gagaacctgccaaaggaagaatggaaaaaaaaacgatcacgtgattttaatgatatactt 301
Query: 399 aagccttctcaatgaaatgcatcttttacgcgatgatctgccttattctcgaaatatatg 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aagccttctcaatgaaatgcatcttttacgcgatgatctgccttattctcgaaatatatg 361
Query: 459 ttaaacataacgagttaccgtcacagctttttgacatagcataaaaatatatcatcagaa 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttaaacataacgagttaccgtcacagctttttgacatagcataaaaatatatcatcagaa 421
Query: 519 gccgcttgagatactactatgtttacacaaggtcagcatgttcggtcagaacatgcagga 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gccgcttgagatactactatgtttacacaaggtcagcatgttcggtcagaacatgcagga 481
Query: 579 actaaagatgaagcctttggaaagataaaaccaatctgtgtgagactctcccaagttacc 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 actaaagatgaagcctttggaaagataaaaccaatctgtgtgagactctcccaagttacc 541
Query: 639 ttcaggaaagatgagctactcatattacaggatccgcagttaaaacagttactacaagat 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ttcaggaaagatgagctactcatattacaggatccgcagttaaaacagttactacaagat 601
Query: 699 ttgattcaaaacttagatatccttataactaagcacaaatcgctttcagggaggtttgga 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ttgattcaaaacttagatatccttataactaagcacaaatcgctttcagggaggtttgga 661
Query: 759 gactatgtgtttgtgcctatctctgcaatgttgaaaacgtgtaaatcacttccggaccca 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gactatgtgtttgtgcctatctctgcaatgttgaaaacgtgtaaatcacttccggaccca 721
Query: 819 attgcaacattagtattcgaaattttggcgagaatwatagacgtttcgtggagtttaccg 878
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 722 attgcaacattagtattcgaaattttggcgagaataatagacgtttcgtggagtttaccg 781
Query: 879 gcgacagtkgatcggaacacattctcgcagcttctttccctatcaacctttctaatatct 938
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 gcgacagtggatcggaacacattctcgcagcttctttccctatcaacctttctaatatct 841
Query: 939 accgatctagaaaatgtcaaccttcccaataaaccagacgaattcaagattgcttccatc 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 accgatctagaaaatgtcaaccttcccaataaaccagacgaattcaagattgcttccatc 901
Query: 999 agacttttaagagttttgtattccacagcagccttcaagggatggggtgcaaat 1052
|||||||||||||||||||||||||||||||| ||||||| ||||| |||||||
Sbjct: 902 agacttttaagagttttgtattccacagcagctttcaaggaatgggatgcaaat 955
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7543
Number of Sequences: 1807
Number of extensions: 7543
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 1052
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1036
effective length of database: 10,329,639
effective search space: 10701506004
effective search space used: 10701506004
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)